STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC48480.1Transcriptional regulator, BadM/Rrf2 family. (148 aa)    
Predicted Functional Partners:
SMC62174.1
Cysteine desulfurase.
  
 
 0.681
SMC63798.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 
 0.681
SMC82580.1
Cysteine desulfurase.
  
 
 0.681
SMC63772.1
Nitrogen fixation protein NifU.
  
  
 0.589
SMC35600.1
Flagellar motor switch protein FliG.
   
   0.581
SMC68739.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
  
 0.529
SMC76426.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.529
SMC48490.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.459
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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