STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC80615.1Toxin 37. (586 aa)    
Predicted Functional Partners:
SMC80602.1
Hypothetical protein.
       0.746
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.642
SMC78852.1
Protein of unknown function.
  
 
 0.642
SMC34727.1
Hypothetical protein.
  
 
 0.601
SMC78866.1
Protein of unknown function.
  
 
 0.595
SMC64972.1
Threonine dehydratase.
   
 
  0.505
SMC88798.1
Ca2+-transporting ATPase.
   
    0.443
SMC48296.1
Mg2+-importing ATPase.
   
    0.443
SMC48807.1
Ca2+-transporting ATPase.
   
    0.443
SMC65014.1
Hypothetical protein.
   
    0.424
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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