STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO67413.1Transcriptional regulator, GntR family. (243 aa)    
Predicted Functional Partners:
SHO66711.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SHO66524.1
Transcriptional regulator, GntR family.
  
     0.768
SHO67312.1
DNA-binding transcriptional regulator, FadR family.
  
    0.747
SHO65599.1
DNA-binding transcriptional regulator, GntR family.
  
     0.729
SHO66396.1
DNA-binding transcriptional regulator, FadR family.
  
    0.714
SHO67197.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.695
SHO66487.1
DNA-binding transcriptional regulator, FadR family.
  
    0.614
SHO66544.1
DNA-binding transcriptional regulator, FadR family.
  
    0.605
SHO67412.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.592
SHO65645.1
Transcriptional regulator, GntR family.
  
    0.574
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.