STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711985_02729Unannotated protein. (147 aa)    
Predicted Functional Partners:
GCA_000711985_00795
Unannotated protein.
    
  0.762
GCA_000711985_02730
Unannotated protein.
       0.667
GCA_000711985_02153
Unannotated protein.
   
    0.637
GCA_000711985_02728
Unannotated protein.
       0.591
GCA_000711985_02727
Unannotated protein.
    
  0.546
GCA_000711985_01085
Unannotated protein.
  
  
  0.479
GCA_000711985_02731
Unannotated protein.
       0.469
GCA_000711985_01638
Unannotated protein.
    
  0.442
Your Current Organism:
Pararheinheimera texasensis
NCBI taxonomy Id: 1123055
Other names: P. texasensis DSM 17496, Pararheinheimera texasensis DSM 17496, Rheinheimera texasensis DSM 17496
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.