STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711725_03136Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_000711725_00504
Unannotated protein.
 
 
  0.906
GCA_000711725_03196
Unannotated protein.
  
 
 0.890
GCA_000711725_00505
Unannotated protein.
  
 
  0.826
GCA_000711725_02752
Unannotated protein.
  
  
  0.809
GCA_000711725_00975
Unannotated protein.
 
 
  0.791
GCA_000711725_04834
Unannotated protein.
    
  0.778
GCA_000711725_05635
Unannotated protein.
    
  0.778
GCA_000711725_02127
Unannotated protein.
 
 
  0.775
GCA_000711725_03044
Unannotated protein.
     
 0.773
GCA_000711725_05653
Unannotated protein.
     
 0.773
Your Current Organism:
Roseomonas aerilata
NCBI taxonomy Id: 1123060
Other names: R. aerilata DSM 19363, Roseomonas aerilata DSM 19363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.