STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPX87752.1Outer membrane receptor protein, mostly Fe transport. (230 aa)    
Predicted Functional Partners:
EPX87751.1
Outer membrane receptor; For ferrienterochelin and colicins.
     0.992
EPX87757.1
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.984
EPX87755.1
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
  
 0.946
EPX87756.1
Biopolymer transport protein.
 
  
 0.940
EPX87753.1
Hypothetical protein.
 
     0.937
EPX87754.1
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
  
 0.936
EPX87749.1
ABC-type hemin transport system, periplasmic component.
 
  
 0.903
EPX87750.1
Putative heme degradation protein.
 
  
 0.892
hmuV
ABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.870
EPX85856.1
Hypothetical protein.
  
 
 0.762
Your Current Organism:
Rubellimicrobium thermophilum
NCBI taxonomy Id: 1123069
Other names: R. thermophilum DSM 16684, Rubellimicrobium thermophilum DSM 16684
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