STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_00811Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000378165_00813
Unannotated protein.
 
 
 0.997
GCA_000378165_00812
Unannotated protein.
 
 
 0.993
GCA_000378165_00931
Unannotated protein.
     
 0.934
GCA_000378165_00724
Unannotated protein.
     
 0.691
GCA_000378165_00910
Unannotated protein.
  
  
 0.690
GCA_000378165_00589
Unannotated protein.
  
  
 0.587
GCA_000378165_01128
Unannotated protein.
  
  
 0.584
GCA_000378165_00168
Unannotated protein.
    
 0.525
GCA_000378165_00809
Unannotated protein.
       0.413
GCA_000378165_00765
Unannotated protein.
      
 0.410
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.