STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_01008Unannotated protein. (482 aa)    
Predicted Functional Partners:
GCA_000378165_01652
Unannotated protein.
 
 
  0.913
GCA_000378165_01009
Unannotated protein.
  
  0.904
GCA_000378165_01653
Unannotated protein.
 
  0.890
GCA_000378165_01145
Unannotated protein.
  
  0.852
GCA_000378165_01712
Unannotated protein.
  
  0.825
GCA_000378165_01756
Unannotated protein.
  
  0.818
GCA_000378165_00775
Unannotated protein.
  
  0.794
GCA_000378165_01667
Unannotated protein.
   
  0.767
GCA_000378165_00561
Unannotated protein.
    
  0.739
GCA_000378165_00093
Unannotated protein.
   
  0.736
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.