STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378165_01284Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000378165_01285
Unannotated protein.
       0.805
GCA_000378165_01286
Unannotated protein.
       0.701
GCA_000378165_01287
Unannotated protein.
       0.701
GCA_000378165_01283
Unannotated protein.
       0.648
GCA_000378165_01292
Unannotated protein.
 
     0.620
GCA_000378165_01282
Unannotated protein.
       0.554
GCA_000378165_01295
Unannotated protein.
 
     0.546
GCA_000378165_01905
Unannotated protein.
     
 0.493
GCA_000378165_01280
Unannotated protein.
       0.477
GCA_000378165_01281
Unannotated protein.
       0.477
Your Current Organism:
Saccharibacter floricola
NCBI taxonomy Id: 1123227
Other names: S. floricola DSM 15669, Saccharibacter floricola DSM 15669
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.