STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_00092Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000378185_03137
Unannotated protein.
 
 0.994
GCA_000378185_00844
Unannotated protein.
   
 0.944
GCA_000378185_00830
Unannotated protein.
  
 0.943
GCA_000378185_01078
Unannotated protein.
   
 0.938
GCA_000378185_03043
Unannotated protein.
    
 0.927
GCA_000378185_02875
Unannotated protein.
    
 
 0.899
GCA_000378185_01948
Unannotated protein.
   
 0.885
GCA_000378185_01311
Unannotated protein.
    
  0.873
GCA_000378185_02368
Unannotated protein.
    
  0.873
GCA_000378185_02036
Unannotated protein.
    
  0.849
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.