STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_01341Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000378185_02965
Unannotated protein.
  
     0.564
GCA_000378185_01919
Unannotated protein.
  
     0.487
GCA_000378185_00021
Unannotated protein.
  
     0.477
GCA_000378185_03623
Unannotated protein.
  
     0.458
GCA_000378185_01342
Unannotated protein.
       0.442
GCA_000378185_00708
Unannotated protein.
  
     0.431
GCA_000378185_02472
Unannotated protein.
  
     0.419
GCA_000378185_01340
Unannotated protein.
       0.417
GCA_000378185_00658
Unannotated protein.
  
     0.411
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.