STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378185_02953Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_000378185_02952
Unannotated protein.
  
  
 0.561
GCA_000378185_01681
Unannotated protein.
 
   
 0.557
GCA_000378185_00555
Unannotated protein.
 
     0.542
GCA_000378185_01675
Unannotated protein.
  
     0.496
GCA_000378185_01608
Unannotated protein.
 
     0.468
GCA_000378185_00597
Unannotated protein.
    
   0.459
GCA_000378185_00373
Unannotated protein.
  
     0.454
GCA_000378185_03452
Unannotated protein.
  
     0.441
GCA_000378185_02857
Unannotated protein.
 
     0.420
GCA_000378185_03425
Unannotated protein.
    
   0.418
Your Current Organism:
Salinimonas chungwhensis
NCBI taxonomy Id: 1123236
Other names: S. chungwhensis DSM 16280, Salinimonas chungwhensis BH030046, Salinimonas chungwhensis DSM 16280
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.