STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379465_00503Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000379465_00504
Unannotated protein.
 0.999
GCA_000379465_06566
Unannotated protein.
 0.996
GCA_000379465_00505
Unannotated protein.
 
 
 0.982
GCA_000379465_05420
Unannotated protein.
 
 
 0.924
GCA_000379465_05421
Unannotated protein.
 
 
 0.924
GCA_000379465_06567
Unannotated protein.
 
 
 0.924
GCA_000379465_02111
Unannotated protein.
  
 0.878
GCA_000379465_03476
Unannotated protein.
  
 
 0.804
GCA_000379465_00502
Unannotated protein.
    
  0.741
GCA_000379465_02847
Unannotated protein.
  
 
 0.728
Your Current Organism:
Sciscionella marina
NCBI taxonomy Id: 1123244
Other names: S. marina DSM 45152, Sciscionella marina DSM 45152
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.