STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374045_01421Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_000374045_00054
Unannotated protein.
    
  0.808
GCA_000374045_03971
Unannotated protein.
    
 0.772
GCA_000374045_04680
Unannotated protein.
    
 0.772
GCA_000374045_02054
Unannotated protein.
    
  0.756
GCA_000374045_04865
Unannotated protein.
  
  
  0.660
GCA_000374045_03844
Unannotated protein.
    
   0.482
GCA_000374045_01420
Unannotated protein.
       0.472
GCA_000374045_01130
Unannotated protein.
  
 
 0.438
GCA_000374045_04726
Unannotated protein.
  
     0.430
GCA_000374045_03907
Unannotated protein.
    
 0.419
Your Current Organism:
Segetibacter koreensis
NCBI taxonomy Id: 1123248
Other names: S. koreensis DSM 18137, Segetibacter koreensis DSM 18137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.