STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381005_01829Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000381005_00846
Unannotated protein.
 
 0.999
GCA_000381005_00217
Unannotated protein.
  
  
 0.975
GCA_000381005_00845
Unannotated protein.
 
  
 
0.858
GCA_000381005_01827
Unannotated protein.
       0.773
GCA_000381005_01828
Unannotated protein.
       0.773
GCA_000381005_01830
Unannotated protein.
  
  
 0.748
GCA_000381005_00648
Unannotated protein.
  
    0.624
GCA_000381005_01017
Unannotated protein.
    
 
 0.599
GCA_000381005_01831
Unannotated protein.
       0.435
GCA_000381005_01832
Unannotated protein.
       0.433
Your Current Organism:
Selenomonas bovis
NCBI taxonomy Id: 1123250
Other names: S. bovis DSM 23594, Selenomonas bovis DSM 23594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.