STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380645_02776Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000380645_02775
Unannotated protein.
 
    0.895
GCA_000380645_04067
Unannotated protein.
 
 0.794
GCA_000380645_00039
Unannotated protein.
  
 0.734
GCA_000380645_00279
Unannotated protein.
  
 0.734
GCA_000380645_00587
Unannotated protein.
  
 0.734
GCA_000380645_00720
Unannotated protein.
  
 0.734
GCA_000380645_01085
Unannotated protein.
  
 0.734
GCA_000380645_01125
Unannotated protein.
  
 0.734
GCA_000380645_02176
Unannotated protein.
  
 0.734
GCA_000380645_02200
Unannotated protein.
  
 0.734
Your Current Organism:
Smaragdicoccus niigatensis
NCBI taxonomy Id: 1123258
Other names: S. niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis DSM 44881, Smaragdicoccus niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis NBRC 103563, Smaragdicoccus niigatensis NBRC 103563 = DSM 44881
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.