STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423665_02064Unannotated protein. (270 aa)    
Predicted Functional Partners:
GCA_000423665_03953
Unannotated protein.
  
 
 0.746
GCA_000423665_00942
Unannotated protein.
    
  0.728
GCA_000423665_03794
Unannotated protein.
    
  0.728
GCA_000423665_00102
Unannotated protein.
    
  0.708
GCA_000423665_06258
Unannotated protein.
   
  0.707
GCA_000423665_00186
Unannotated protein.
  
 
 0.689
GCA_000423665_03493
Unannotated protein.
    
  0.682
GCA_000423665_00112
Unannotated protein.
     
 0.677
GCA_000423665_01033
Unannotated protein.
    
 0.676
GCA_000423665_05996
Unannotated protein.
  
  
  0.676
Your Current Organism:
Solirubrobacter soli
NCBI taxonomy Id: 1123262
Other names: S. soli DSM 22325, Solirubrobacter soli DSM 22325
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