STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Su-1Small, acid-soluble spore protein 1; SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light (69 aa)    
Predicted Functional Partners:
AUDQ01000003_gene598
annotation not available
  
   
 0.750
AUDQ01000015_gene883
annotation not available
  
     0.748
AUDQ01000005_gene87
annotation not available
  
     0.713
sspI
annotation not available
  
     0.698
AUDQ01000012_gene1752
annotation not available
  
     0.668
AUDQ01000003_gene539
annotation not available
  
     0.608
AUDQ01000005_gene83
annotation not available
  
     0.590
AUDQ01000001_gene2611
annotation not available
  
     0.584
AUDQ01000001_gene2708
annotation not available
  
   
 0.582
AUDQ01000004_gene236
annotation not available
  
     0.580
Your Current Organism:
Sporosarcina ureae
NCBI taxonomy Id: 1123290
Other names: S. ureae DSM 2281, Sporosarcina ureae, Sporosarcina ureae DSM 2281, Sporosarcina ureae DSM2281
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