STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE03905.1acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
SFE29036.1
Electron transfer flavoprotein beta subunit.
 0.999
SFE29069.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.998
SFE56497.1
Enoyl-CoA hydratase.
 0.994
SFE38935.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.987
SFE06736.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.925
SFE06342.1
methylmalonyl-CoA decarboxylase alpha subunit.
 
 0.922
SFE42947.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.919
SFE42916.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.896
SFE43921.1
methylmalonyl-CoA mutase.
  
 
 0.876
SFE79716.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 0.825
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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