STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425585_02439Unannotated protein. (536 aa)    
Predicted Functional Partners:
GCA_000425585_02464
Unannotated protein.
  
  0.897
GCA_000425585_03159
Unannotated protein.
     0.876
GCA_000425585_02440
Unannotated protein.
 
     0.815
GCA_000425585_03158
Unannotated protein.
  
  0.801
GCA_000425585_02089
Unannotated protein.
 
     0.794
GCA_000425585_03139
Unannotated protein.
 
     0.794
GCA_000425585_00798
Unannotated protein.
  
  0.780
GCA_000425585_03148
Unannotated protein.
   
 0.774
GCA_000425585_03138
Unannotated protein.
 
     0.743
GCA_000425585_03144
Unannotated protein.
 
     0.681
Your Current Organism:
Terrimonas ferruginea
NCBI taxonomy Id: 1123356
Other names: T. ferruginea DSM 30193, Terrimonas ferruginea ATCC 13524, Terrimonas ferruginea DSM 30193, Terrimonas ferruginea IFO 14992, Terrimonas ferruginea NBRC 14992
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.