STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG17245.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
SDF93449.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.746
SDF13246.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.745
SDF08936.1
LysR family transcriptional regulator, regulator for metE and metH; Belongs to the LysR transcriptional regulatory family.
  
     0.722
SDF04395.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.716
SDF50393.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.701
SDF28845.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.699
SDF51492.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.698
SDF37370.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.694
SDF17118.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.693
SDF31000.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.678
Your Current Organism:
Thalassobaculum litoreum
NCBI taxonomy Id: 1123362
Other names: Rhodospirillaceae bacterium CL-GR58, T. litoreum DSM 18839, Thalassobaculum litoreum CL-GR58, Thalassobaculum litoreum DSM 18839
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.