STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C666_01310Unannotated protein. (335 aa)    
Predicted Functional Partners:
C666_05150
Unannotated protein.
  
     0.738
C666_13825
Unannotated protein.
  
     0.681
C666_13545
Unannotated protein.
  
     0.676
C666_04425
Unannotated protein.
  
     0.657
C666_09680
Unannotated protein.
  
     0.635
C666_07640
Unannotated protein.
 
     0.622
C666_14645
Unannotated protein.
  
     0.531
dksA
Unannotated protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.491
C666_10520
Unannotated protein.
  
     0.489
rlmM
Unannotated protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
  
    0.474
Your Current Organism:
Thauera linaloolentis
NCBI taxonomy Id: 1123367
Other names: T. linaloolentis 47Lol = DSM 12138, Thauera linaloolentis 47Lol, Thauera linaloolentis 47Lol = DSM 12138, Thauera linaloolentis DSM 12138, Thauera linaloolentis DSM 12138 = 47Lol, Thauera linaloolentis NBRC 102519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.