STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380185_01182Unannotated protein. (379 aa)    
Predicted Functional Partners:
GCA_000380185_00646
Unannotated protein.
  
  
 0.999
GCA_000380185_01183
Unannotated protein.
 
 0.999
GCA_000380185_02620
Unannotated protein.
 
 
 0.994
GCA_000380185_01184
Unannotated protein.
  
  
 0.967
GCA_000380185_00396
Unannotated protein.
 
  
 0.961
GCA_000380185_01781
Unannotated protein.
 
  
 0.958
GCA_000380185_03321
Unannotated protein.
 
  
 0.957
GCA_000380185_02621
Unannotated protein.
 
  
 0.944
GCA_000380185_01360
Unannotated protein.
  
  
 0.936
GCA_000380185_01181
Unannotated protein.
       0.782
Your Current Organism:
Thiofilum flexile
NCBI taxonomy Id: 1123400
Other names: T. flexile DSM 14609, Thiofilum flexile DSM 14609, Thiothrix flexilis DSM 14609
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.