STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWK73_30005Unannotated protein. (231 aa)    
Predicted Functional Partners:
BWK73_51660
Unannotated protein.
  
 0.942
BWK73_41325
Unannotated protein.
  
 
  0.940
GCA_000621325_00125
Unannotated protein.
   
 0.936
GCA_000621325_03067
Unannotated protein.
   
 0.936
htpG
Unannotated protein; Molecular chaperone. Has ATPase activity.
   
 0.910
alaS
Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.894
GCA_000621325_02410
Unannotated protein.
   
 0.889
BWK73_35630
Unannotated protein.
 
 
 0.861
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.829
BWK73_38665
Unannotated protein.
   
 0.823
Your Current Organism:
Thiothrix lacustris
NCBI taxonomy Id: 1123401
Other names: T. lacustris DSM 21227, Thiothrix lacustris DSM 21227, Thiothrix sp. BL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.