STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS20257.1Polysaccharide export outer membrane protein. (360 aa)    
Predicted Functional Partners:
SFS01590.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 0.998
SFS05225.1
Tyrosine-protein kinase Etk/Wzc.
 
 0.998
SFS21602.1
Capsular polysaccharide transport system permease protein.
 
  
 0.892
SFS04230.1
Capsular polysaccharide export protein.
 
  
 0.883
SFS21605.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.844
SFS19625.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.821
SFS01553.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.782
SFS19730.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.769
SFS22061.1
Methyltransferase domain-containing protein.
  
  
 0.738
SFS04242.1
Capsular polysaccharide export protein.
 
   
 0.614
Your Current Organism:
Yoonia litorea
NCBI taxonomy Id: 1123755
Other names: CCUG 62113, DSM 29433, KCTC 23883, Loktanella litorea, Loktanella litorea Yoon et al. 2013, Loktanella sp. DPG-5, Y. litorea, strain DPG-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.