STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC_02946Related to alpha-acetolactate decarboxylase. (234 aa)    
Predicted Functional Partners:
RCC_02930
Related to Acetolactate synthase; Belongs to the TPP enzyme family.
 
 
 0.870
RCC_02231
Acetolactate synthase.
  
 
 0.812
RCC_03977
Acetolactate synthase.
  
 
 0.812
RCC_04689
Related to BENZOYLFORMATE DECARBOXYLASE; Belongs to the TPP enzyme family.
  
 
 0.812
RCC_07188
Belongs to the TPP enzyme family.
  
 
 0.812
RCC_06822
Probable acetolactate synthase small subunit.
     
 0.808
RCC_02973
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
      
 0.529
Your Current Organism:
Ramularia collocygni
NCBI taxonomy Id: 112498
Other names: CBS 101180, Ophiocladium hordei, Ovularia hordei, R. collo-cygni, Ramularia collo-cygni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.