STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betTHigh-affinity choline transport protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (734 aa)    
Predicted Functional Partners:
codA
Choline oxidase; Function of strongly homologous gene; enzyme.
  
  
 0.819
gbsA
Betaine aldehyde dehydrogenase (BADH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family.
  
  
 0.794
CCF63886.1
Homologs of previously reported genes of unknown function.
       0.762
CCF63882.1
Homologs of previously reported genes of unknown function.
       0.448
Your Current Organism:
Nocardia cyriacigeorgica
NCBI taxonomy Id: 1127134
Other names: N. cyriacigeorgica GUH-2, Nocardia cyriacigeorgica GUH-2, Nocardia cyriacigeorgica str. GUH-2, Nocardia cyriacigeorgica strain GUH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.