Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCF62161.1 | CCF64007.1 | NOCYR_1365 | NOCYR_3242 | Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.772 |
| CCF62161.1 | cbbL | NOCYR_1365 | NOCYR_3243 | Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the RuBisCO large chain family. | 0.692 |
| CCF62161.1 | prkB | NOCYR_1365 | NOCYR_3239 | Homologs of previously reported genes of unknown function. | Phosphoribulokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.468 |
| CCF62465.1 | CCF64007.1 | NOCYR_1676 | NOCYR_3242 | Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.736 |
| CCF62465.1 | cbbL | NOCYR_1676 | NOCYR_3243 | Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the RuBisCO large chain family. | 0.774 |
| CCF63968.1 | CCF64007.1 | NOCYR_3203 | NOCYR_3242 | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.914 |
| CCF63968.1 | CCF64577.1 | NOCYR_3203 | NOCYR_3814 | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative haloacid dehalogenase-like hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.900 |
| CCF63968.1 | cbbL | NOCYR_3203 | NOCYR_3243 | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the RuBisCO large chain family. | 0.911 |
| CCF64007.1 | CCF62161.1 | NOCYR_3242 | NOCYR_1365 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Homologs of previously reported genes of unknown function. | 0.772 |
| CCF64007.1 | CCF62465.1 | NOCYR_3242 | NOCYR_1676 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Homologs of previously reported genes of unknown function. | 0.736 |
| CCF64007.1 | CCF63968.1 | NOCYR_3242 | NOCYR_3203 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.914 |
| CCF64007.1 | CCF64577.1 | NOCYR_3242 | NOCYR_3814 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative haloacid dehalogenase-like hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.914 |
| CCF64007.1 | cbbF | NOCYR_3242 | NOCYR_3240 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Fructose-1,6-bisphosphatase, (D-fructose-1, 6-bisphosphate 1-phosphohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FBPase class 1 family. | 0.882 |
| CCF64007.1 | cbbL | NOCYR_3242 | NOCYR_3243 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the RuBisCO large chain family. | 0.999 |
| CCF64007.1 | cbbR | NOCYR_3242 | NOCYR_3244 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | HTH-type transcriptional regulator cbbR (RuBisCO operon transcriptional regulator); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the LysR transcriptional regulatory family. | 0.764 |
| CCF64007.1 | cbxXC | NOCYR_3242 | NOCYR_3241 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Protein cbxX, plasmid; Function of strongly homologous gene; factor. | 0.961 |
| CCF64007.1 | pgk | NOCYR_3242 | NOCYR_3476 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Phosphoglycerate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phosphoglycerate kinase family. | 0.917 |
| CCF64007.1 | prkB | NOCYR_3242 | NOCYR_3239 | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Phosphoribulokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.993 |
| CCF64577.1 | CCF63968.1 | NOCYR_3814 | NOCYR_3203 | Putative haloacid dehalogenase-like hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.900 |
| CCF64577.1 | CCF64007.1 | NOCYR_3814 | NOCYR_3242 | Putative haloacid dehalogenase-like hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.914 |
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