STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1911Hypothetical protein. (144 aa)    
Predicted Functional Partners:
wrbA
Trp repressor binding protein; Belongs to the WrbA family.
       0.791
arsC-3
Arsenate reductase.
       0.785
GLIP_1543
Hypothetical protein.
  
     0.746
GLIP_0038
Hypothetical protein.
  
     0.743
gspN
General secretion pathway protein N.
  
     0.733
exeL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.728
GLIP_3345
Hypothetical protein.
  
     0.700
gspH
General secretion pathway protein H.
  
     0.659
GLIP_1715
Hypothetical protein.
  
     0.622
GLIP_2147
Cytochrome c oxidase, subunit CcoQ.
  
     0.616
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.