STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2472Hypothetical protein. (347 aa)    
Predicted Functional Partners:
GLIP_2470
Polysaccharide transporter, PST family.
 
 
  0.825
GLIP_0917
Alpha-amylase, putative.
  
  0.740
GLIP_2471
Hypothetical protein.
  
 
  0.718
GLIP_1969
Isoamylase protein-like protein.
   
  0.694
glgB
1,4-alpha-glucan branching enzyme.
   
  0.694
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.694
GLIP_2480
Hypothetical protein.
    
 
 0.605
manC
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.576
GLIP_4110
Hypothetical protein.
   
 0.569
GLIP_0795
Hypothetical protein.
 
    0.516
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.