STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK04566.1Peroxiredoxin. (188 aa)    
Predicted Functional Partners:
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.773
SDK04626.1
Glucose-1-phosphate adenylyltransferase.
       0.773
SDK04539.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.511
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
      0.479
SDK20689.1
Oligopeptidase B.
 
      0.473
Your Current Organism:
Flavobacterium noncentrifugens
NCBI taxonomy Id: 1128970
Other names: CGMCC 1.10076, F. noncentrifugens, Flavobacterium noncentrifugens Zhu et al. 2013, Flavobacterium sp. R-HLS-17, NBRC 108844, strain R-HLS-17
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.