STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC579_10382Uncharacterized protein. (399 aa)    
Predicted Functional Partners:
AC579_8872
WD_REPEATS_REGION domain-containing protein.
    
  0.495
AC579_8088
TFIID_20kDa domain-containing protein.
    
  0.479
AC579_1541
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.479
AC579_7577
Uncharacterized protein.
    
  0.474
AC579_8304
Uncharacterized protein.
    
  0.469
AC579_4336
SCA7 domain-containing protein.
    
  0.468
AC579_607
Uncharacterized protein.
    
  0.467
AC579_6621
Telo_bind domain-containing protein.
    
  0.450
AC579_6311
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.449
AC579_3036
TAF domain-containing protein.
    
  0.432
Your Current Organism:
Pseudocercospora musae
NCBI taxonomy Id: 113226
Other names: Mycosphaerella musicola, Mycosphaerella musicola R. Leach, P. musae
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