STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332235_00555Unannotated protein. (1083 aa)    
Predicted Functional Partners:
GCA_000332235_01371
Unannotated protein.
  
    0.613
GCA_000332235_01689
Unannotated protein.
  
 
0.567
GCA_000332235_01250
Unannotated protein.
  
 
0.563
GCA_000332235_00556
Unannotated protein.
       0.542
GCA_000332235_01999
Unannotated protein.
   
 0.504
GCA_000332235_01488
Unannotated protein.
  
  0.500
GCA_000332235_00485
Unannotated protein.
  
  0.490
GCA_000332235_03619
Unannotated protein.
  
     0.489
GCA_000332235_01611
Unannotated protein.
     
 0.486
GCA_000332235_00432
Unannotated protein.
  
 
0.471
Your Current Organism:
Geminocystis herdmanii
NCBI taxonomy Id: 113355
Other names: G. herdmanii PCC 6308, Geminocystis herdmanii PCC 6308, Gloeocapsa alpicola CALU 743, Synechocystis sp. ATCC 27150, Synechocystis sp. ATCC 27267, Synechocystis sp. PCC 6308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.