STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM89391.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
KRM89390.1
Manganese transporter NRAMP.
  
  
 0.805
KRM89729.1
Universal stress protein.
  
     0.597
KRM89389.1
Hypothetical protein.
  
  
 0.577
KRM89727.1
Hypothetical protein.
  
     0.554
KRM88825.1
Hypothetical protein.
  
   
 0.548
KRM84592.1
IpaB EvcA family protein.
  
     0.520
KRM88770.1
Hypothetical protein.
  
     0.497
KRM89463.1
Lipoprotein, pheromone precursor.
  
    0.468
KRM89503.1
Putative universel stress protein.
  
     0.449
KRM88771.1
Lipase acylhydrolase.
  
     0.446
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.