STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_2098Trehalose synthase. (572 aa)    
Predicted Functional Partners:
SHJG_2099
Putative pep2 protein.
 0.999
SHJG_6519
Pep2 protein.
 0.999
glgB
Putative 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.984
SHJG_7153
Alpha-amylase.
 
 
0.967
SHJG_6522
Glycogen phosphorylase.
  
 0.964
SHJG_6538
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.964
SHJG_7159
Alpha-amylase.
 
 
0.964
SHJG_2095
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 0.963
SHJG_4828
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.963
SHJG_7161
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.963
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.