STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_4013Neuramidase. (405 aa)    
Predicted Functional Partners:
SHJG_7509
Neuraminidase.
 
  
 
0.921
SHJG_3753
Neuramidase.
  
  
 
0.904
SHJG_0110
Alpha-galactosidase.
     
  0.650
SHJG_0246
Alpha-galactosidase.
     
  0.650
SHJG_1048
Alpha galactosidase precursor.
     
  0.650
SHJG_2526
Alpha-galactosidase.
     
  0.650
SHJG_7663
Alpha-galactosidase.
     
  0.650
SHJG_8422
Galactosidase.
     
  0.650
SHJG_8426
Alpha-galactosidase.
     
  0.650
SHJG_4012
Dihydrodipicolinate synthase; Belongs to the DapA family.
   
 0.644
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.