STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_6818Protein kinase. (710 aa)    
Predicted Functional Partners:
SHJG_5221
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.849
SHJG_3913
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.844
SHJG_2801
Hypothetical protein.
 
 
 
 0.753
SHJG_6817
Hypothetical protein.
 
    
0.728
SHJG_4174
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.616
SHJG_6836
Two-component system sensor kinase.
   
 
 0.609
SHJG_5178
Hypothetical protein.
  
     0.606
SHJG_4571
Lipoprotein.
   
 
 0.596
SHJG_3594
Eukaryotic-type serine/threonine protein kinase.
 
 
0.587
SHJG_5218
Serine/threonine protein kinase.
 
 
0.586
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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