STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_7399Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa)    
Predicted Functional Partners:
SHJG_7398
Hydrolase.
 
 
 0.992
SHJG_7401
Hydrolase.
 
 
 0.980
SHJG_5522
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.932
SHJG_8487
Pyridoxal-dependent decarboxylase.
  
 0.932
SHJG_0115
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.923
SHJG_0850
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.923
SHJG_2175
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SHJG_2643
Putative aldehyde dehydrogenase.
 
 0.923
SHJG_3155
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.923
SHJG_4228
Methylmalonic acid semialdehyde dehydrogenase.
  
 0.923
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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