Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SHJG_0115 | SHJG_4228 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Methylmalonic acid semialdehyde dehydrogenase. | 0.921 |
SHJG_0115 | SHJG_5522 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.912 |
SHJG_0115 | SHJG_7398 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_0115 | SHJG_7399 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
SHJG_0115 | SHJG_7401 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_0115 | SHJG_8487 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyridoxal-dependent decarboxylase. | 0.912 |
SHJG_0850 | SHJG_4228 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Methylmalonic acid semialdehyde dehydrogenase. | 0.920 |
SHJG_0850 | SHJG_5522 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.912 |
SHJG_0850 | SHJG_7398 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_0850 | SHJG_7399 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
SHJG_0850 | SHJG_7401 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_0850 | SHJG_8487 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyridoxal-dependent decarboxylase. | 0.912 |
SHJG_2175 | SHJG_4228 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Methylmalonic acid semialdehyde dehydrogenase. | 0.913 |
SHJG_2175 | SHJG_5522 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.912 |
SHJG_2175 | SHJG_7398 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_2175 | SHJG_7399 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
SHJG_2175 | SHJG_7401 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hydrolase. | 0.910 |
SHJG_2175 | SHJG_8487 | Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyridoxal-dependent decarboxylase. | 0.912 |
SHJG_2643 | SHJG_7399 | Putative aldehyde dehydrogenase. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
SHJG_3155 | SHJG_4228 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Methylmalonic acid semialdehyde dehydrogenase. | 0.921 |
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