STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFOP00015017060Matrix metallopeptidase 20b (enamelysin). (444 aa)    
Predicted Functional Partners:
timp2
Metalloproteinase inhibitor 2-like.
   
 0.629
LOC108922557
TIMP metallopeptidase inhibitor 2-like.
   
 0.629
LOC108931553
Metalloproteinase inhibitor 3-like.
   
 0.541
TIMP3
NTR domain-containing protein.
   
 0.541
Timp4
Metalloproteinase inhibitor 4-like.
   
 0.522
MMP15
Matrix metalloproteinase-15-like.
  
0.509
LOC108926332
Matrix metalloproteinase-15-like.
  
0.508
plg
Plasminogen-like; Belongs to the peptidase S1 family.
   
 0.507
Z043_113015
Matrix metalloproteinase-14-like.
  
0.503
LOC108934531
CD44 antigen-like.
   
 0.484
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.