STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_110999Type II inositol 1,4,5-trisphosphate 5-phosphatase-like. (838 aa)    
Predicted Functional Partners:
pheta1
Sesquipedalian-1-like.
    
 
 0.815
sacm1l
Phosphatidylinositide phosphatase SAC1-A-like.
 
  
 
 0.710
LOC108938327
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.665
CLTC
Clathrin heavy chain 1-like.
    
 0.665
LOC108920174
Clathrin heavy chain 1-like.
    
 0.665
Z043_104959
Cyclin-G-associated kinase-like.
   
 
 0.647
Synj1
Synaptojanin-1-like.
    
0.628
snapin
SNARE-associated protein Snapin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking and synaptic vesicle recycling; Belongs to t [...]
   
 
  0.598
prpf19
Uncharacterized protein.
    
   0.561
Pik3c2b
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta-like; Belongs to the PI3/PI4-kinase family.
     
 0.556
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.