STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067NP58WD_REPEATS_REGION domain-containing protein. (311 aa)    
Predicted Functional Partners:
A0A067NST1
NACHT domain-containing protein.
 
      0.898
A0A067N369
Uncharacterized protein.
   
 0.840
A0A067NMI9
Nop domain-containing protein.
   
 0.737
A0A067NWV6
Small nuclear ribonucleoprotein Sm D3.
   
  0.718
A0A067NT96
Tr-type G domain-containing protein.
   
 0.704
A0A067P1M2
TPR_REGION domain-containing protein.
   
 0.698
A0A067P1V9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.697
A0A067NY83
Sm domain-containing protein.
   
  0.695
A0A067NZV1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.692
A0A067NKU9
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
  
  0.691
Your Current Organism:
Pleurotus ostreatus
NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15
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