STRINGSTRING
ABB56108.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56108.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56108.1annotation not available (253 aa)    
Predicted Functional Partners:
ABB56280.1
annotation not available (396 aa)
 
  0.961
ABB56107.1
annotation not available (437 aa)
              0.845
ABB56281.1
annotation not available (261 aa)
 
  0.812
ABB57306.1
annotation not available (260 aa)
   
          0.706
ABB56279.1
annotation not available (377 aa)
     
  0.698
ABB56920.1
annotation not available (1536 aa)
         
  0.629
ABB56109.1
annotation not available (229 aa)
              0.616
ABB57846.1
annotation not available (977 aa)
   
 
  0.602
ABB56106.1
annotation not available (117 aa)
              0.589
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (398 aa)
              0.407
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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