STRINGSTRING
ABB56122.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56122.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56122.1annotation not available (327 aa)    
Predicted Functional Partners:
ABB57728.1
annotation not available (113 aa)
           
  0.697
ABB56121.1
annotation not available (244 aa)
              0.686
ABB57999.1
annotation not available (125 aa)
   
     
  0.681
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (76 aa)
 
          0.673
glnB
Nitrogen regulatory protein P-II; P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is phosphorylated, these events are reversed. In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P- II is phosphorylated which allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme; Belongs to the P(II) protein family (112 aa)
           
  0.670
ABB58091.1
annotation not available (89 aa)
   
          0.625
ABB57789.1
annotation not available (67 aa)
   
          0.625
ABB56260.1
annotation not available (86 aa)
   
          0.621
ABB58427.1
annotation not available (175 aa)
   
          0.618
ABB57361.1
annotation not available (58 aa)
   
          0.610
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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