STRINGSTRING
ABB56214.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56214.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56214.1annotation not available (241 aa)    
Predicted Functional Partners:
ABB57194.1
annotation not available (474 aa)
   
          0.699
ABB58422.1
annotation not available (486 aa)
   
          0.640
SEA0045
annotation not available (410 aa)
   
          0.621
ABB57918.1
annotation not available (346 aa)
 
     
  0.619
ABB58069.1
annotation not available (268 aa)
   
          0.614
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (368 aa)
   
 
  0.609
ABB56992.1
16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (451 aa)
   
 
  0.607
ABB56438.1
annotation not available (133 aa)
   
          0.596
ABB56082.1
annotation not available (848 aa)
 
        0.586
ABB56759.1
annotation not available (847 aa)
   
          0.573
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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