STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56280.1Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine. (396 aa)    
Predicted Functional Partners:
ABB56279.1
ABC-type permease for basic amino acids and glutamine.
 
0.999
ABB56281.1
ATPase.
 0.999
ABB56278.1
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.997
ABB56108.1
Extracellular solute-binding protein, family 3.
 
 0.981
ABB57306.1
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.877
ABB56283.1
Exonuclease.
  
    0.721
ABB56282.1
Conserved hypothetical protein.
       0.718
ABB56920.1
Glutamate synthase (ferredoxin).
   
  
 0.519
ABB56277.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.499
ABB56276.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.493
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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