STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56281.1ATPase. (261 aa)    
Predicted Functional Partners:
ABB56280.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 0.999
ABB56278.1
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.996
ABB56279.1
ABC-type permease for basic amino acids and glutamine.
 
 
 0.996
ABB56112.1
Probable ABC transporter permease protein.
 
      0.900
ABB58082.1
Probable oligopeptides ABC transporter permease protein.
 
    
 0.900
ABB57342.1
ATPase.
 
     
0.899
ABB57306.1
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.877
ABB56108.1
Extracellular solute-binding protein, family 3.
 
 
 0.876
sek0025
ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like.
 
    
 0.873
ABB56283.1
Exonuclease.
       0.776
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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