STRINGSTRING
ABB56298.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56298.1" - annotation not available in Synechococcus elongatus PCC7942
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56298.1annotation not available (185 aa)    
Predicted Functional Partners:
dnaK3
Chaperone protein dnaK3; Acts as a chaperone (749 aa)
 
 
  0.928
dnaK1
Chaperone protein dnaK1; Acts as a chaperone (655 aa)
 
 
  0.884
ABB56297.1
annotation not available (91 aa)
              0.882
dnaK2
Chaperone protein dnaK2; Acts as a chaperone (634 aa)
 
 
  0.872
ABB56143.1
annotation not available (531 aa)
 
 
  0.755
grpE
Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- dependent [...] (207 aa)
 
 
  0.681
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (299 aa)
   
   
  0.617
ABB57497.1
annotation not available (229 aa)
   
          0.617
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (645 aa)
   
 
  0.565
ABB57724.1
annotation not available (858 aa)
   
 
  0.499
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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