STRINGSTRING
ABB56317.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56317.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56317.1annotation not available (113 aa)    
Predicted Functional Partners:
ccmL
annotation not available (99 aa)
 
 
 
  0.934
ccmM
Carbon dioxide concentrating mechanism protein CcmM; The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator (539 aa)
     
 
  0.786
ABB56316.1
annotation not available (102 aa)
 
     
0.781
ABB56318.1
annotation not available (120 aa)
              0.598
ABB56552.1
annotation not available (213 aa)
   
          0.583
icfA
Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation (272 aa)
           
  0.555
ABB56315.1
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (334 aa)
              0.506
ABB56319.1
annotation not available (231 aa)
              0.481
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (16%) [HD]