STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56362.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
ABB56361.1
Conserved hypothetical protein.
 
     0.774
ABB56371.1
Conserved hypothetical protein.
 
     0.771
ABB56360.1
Phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
 
     0.763
ABB58281.1
Alr0113 (ycf52)-like.
  
     0.760
ABB57107.1
Conserved hypothetical protein.
  
     0.756
ABB57973.1
Cell division protein Ftn2-like.
  
     0.752
ABB57278.1
Conserved hypothetical protein.
  
     0.741
ldpA
Light dependent period.
  
     0.739
ABB56284.1
Hypothetical protein.
  
     0.726
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
       0.721
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.