STRINGSTRING
ABB56374.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56374.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56374.1annotation not available (75 aa)    
Predicted Functional Partners:
chpY
annotation not available (430 aa)
   
          0.774
cpcF
Phycobilisome maturation protein; Required for the chromophorylation of the cpcA gene product (207 aa)
   
          0.759
ABB57079.1
annotation not available (273 aa)
   
          0.752
ABB57080.1
annotation not available (289 aa)
   
          0.749
ABB56325.1
annotation not available (112 aa)
   
          0.736
cpcE
Phycocyanobilin lyase subunit alpha; Required for the chromophorylation of the cpcA gene product (273 aa)
   
          0.732
chpX
annotation not available (379 aa)
   
          0.716
ABB56359.1
annotation not available (161 aa)
 
          0.709
ABB56358.1
annotation not available (161 aa)
 
          0.700
ABB56360.1
annotation not available (705 aa)
 
          0.698
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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